Product Backlog - Mei

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Mei-Hui Su's Project/Product Backlog

Project/Product Backlog

  1. learn the tools used in https://ds.iris.edu/ds/products/emc-desktoptools/. paraview for desktop
  2. define the json blob for material properties used in plotting scripts, define import and export to file format, https://scec.usc.edu/scecpedia/LA_Vertical_Profiles#Result
  3. define sop & doc steps for generating ucvm.e
  4. tied up loose ends in UCVMC18.5 and test
  5. need to make UCVMC work with python3(Scott said bw is stern about it), mainly plotting and config/build scripts
  6. Discuss mesh plotting Scripts with Scott Cal.

DONE

  1. look into updating Wills' map in UCVMC, https://scec.usc.edu/scecpedia/Wills_Map
  2. work to make Rob Grave's mesh generating code to work for him (tweak Rob's directory and Scott's https://source.usc.edu/svn/cybershake/import/trunk/UCVM)
  3. doc how to process .bin file generated from plotting script or ucvm basin_query call, https://scec.usc.edu/scecpedia/UCVMC_How_to_process_bin_data
  4. translate pbs/hpc/ucvm2mesh to slurm calls
  5. (No work done)Generate large (100M+ point) AWP mesh using ucvmc and ucvmp and compare(Scott said ucvmp can not generate big mesh since it does not have mpi flavor to it)
  6. Bay Area velocity model's z2.5 plots for Kevin, https://scec.usc.edu/scecpedia/Bay_Area_Velocity_Model_Z2.5_data#Result
  7. updated cca06 crossing data for Kevin (fuzzy edge problem compare to UCVM python version, a bug found by Scott in CCA06 C version), nwo includes two sets, one without GTL and the other with GTL, https://scec.usc.edu/scecpedia/Final_CCA06_Crossings_Result
  8. Doc how La Habra mesh is made with ucvm2mesh_mpi_layer, https://scec.usc.edu/scecpedia/UCVMC_La_Habra_mesh_generation#ucvm2mesh_mpi_layer
  9. Generated various plots highlight CS17.3-H, https://scec.usc.edu/scecpedia/UCVMC_CS17.3-H_plots#Plots
  10. Registered new Central California Basin Model from Havard. CS17.3-H with ELY GTL
  11. built a useable UCVMC installation on Titan, /lustre/atlas/proj-shared/geo112/ucvm_18_5/
  12. made UCVMC statically linkable and the plugin models worked as in dynamically linked UCVMC
  13. reworked logic in ucvm2mesh-mpi to have a more 'feasible' compute node requirement for very large mesh like La Habra, ucvm2mesh_mpi_layer, remember to strip result directory when running at blue waters. lfs setstripe -c 4 /path/to/working/directory
  14. extract UCVMC cs173 info for Scott's gridpoints (off alittle but okayed by Scott)
  15. reworked basin_query tests in slurm on hpc
  16. created a pull request to official UCVM-C, fix up each models that is in github -- merged into official UCVMC's dev branch
  17. Ran tests tiling cencal+cca+cvms5+bbp1d, the 1d part gets surface gtl
  18. Tiled cencal+cca(with gtl)+cvms5(with gtl)+1d tested and verified
  19. GTL for CCA06- verified by generating identical plots to CyberShake_Study_18.5
  20. Fixed plugin/dynamic loading of modules, Scott's interleaving bug, fixes for cvmsi is also needed for the plugin module. There was the missed case for left-over points in chunking/processing code, fixed that. Also the code was not setup to take more than one dynamic library
  21. Setup to run my latest UCVMC on blue water - query works but plotting scripts do not work with BW's installed default pthread library(too old, conflicting with matplotlib's pyplot from Anaconda2)
  22. Fixed segfaults flagged from a working ucvmc installation on local mac (fixed cs173_final(), cca_final()), (mac gdb installation hints: https://gist.github.com/gravitylow/fb595186ce6068537a6e9da6d8b5b96d)
  23. Ran basin_query_mpi on hpc with SLURM
  24. Doc projection fix on scecpedia, https://scec.usc.edu/scecpedia/Final_Projection_Review_Result
  25. Add the fixed config file into CCA's github, also edits from below(pending moving to scec space): https://github.com/meihuisu/CCA.git
  26. Copy the CCA06 data on scec-01/Intensity to hypocenter, change the dependency to hypocenter in the make-data script
  27. adding elygtl to CCA06
  28. new cs173 github location(pending moving to scec space):https://github.com/meihuisu/cs173.git
  29. Register Scott NorCal model into UCVM
 - CS173, compare CS173 plots from ScottC with my version
  30. Doc CCA06 Crossing review, https://scec.usc.edu/scecpedia/Final_CCA06_Crossings_Result
  31. Update basin_query_mpi to return list of crossing per grid point, also return one crossing output file for each algorithm.
  32. To check projection fix, trace processing from en-jui data files to configuration files
  33. Cross section plots showing 0-10km depth through CCA06, showing velocity inversions, starting at one end of region at 5km spacing to other end of region. **No need, posted inversion plot in scecpedia**

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