UCVM Command Reference
UCVM Command Reference (v15.10.0)
Contents
- 1 UCVM Software Collection
- 2 Command Reference Conventions
- 3 UCVM Command Collections
- 4 /bin
- 5 /test
- 6 /utilities
- 7 basin_query
- 8 ecoalesce
- 9 ecompact
- 10 grd_query
- 11 grd2etree
- 12 mesh-check
- 13 mesh-op
- 14 mesh-strip-ijk
- 15 ucvm2etree-extract-MPI.txt
- 16 ucvm2etree-merge-MPI
- 17 ucvm2etree-sort-MPI
- 18 ucvm2etree
- 19 ucvm2mesh-mpi
- 20 ucvm2mesh
- 21 ucvm_query
- 22 vs30_query
- 23 Related Entries
UCVM Software Collection
The UCVM software is a software framework that builds on top of several existing scientific software packages, including CVM-H, CVM-S4, and the USGS Bay Area Model. The UCVM installation process involves first compiling the individual CVM programs, and then compiling and installed the UCVM framework.
The UCVM installation process involves two code directory trees, the src tree, and the bin tree. UCVM source codes and models are collected in the src directory tree. When UCVM is built, it is installed into a separate directory location, called the bin directory tree. Once UCVM is correctly built and installed, user configure their computing environment to point to the bin directory. All supported UCVM commands are contained in the UCVM bin tree.
Command Reference Conventions
We base our instructions and documentation assuming a standard open source software environment.
Default installation operating system is a 2015 or later Linux distribution with Python 2.7, multiple packages, gnu c and fortran compilers.
Default user shell is a bash shell and our documentation.
Command line examples are shown as: %ucvm_command
We will call the bin directory tree $UCVM_HOME_DIR in the command descriptions below:
UCVM Command Collections
UCVM commands are located in the bin tree, in several directories including $UCMV_HOME_DIR subdirectories:
/bin
- #basin_query
- #ecoalesce
- #ecompact
- #grd2etree
- #grd_query
- #mesh-check
- #mesh-op
- #mesh-strip-ijk
- #patchmodel
- #run_grd.sh
- #run_ucvm.sh
- #ssh_generate
- #ssh_merge
- #ucvm2etree
- #ucvm2mesh
- #ucvm_query
- #vs30_query
/test
- inputs
- test-grid.in
- ref
- test-grid-lib-1d.ref
- test-grid-ucvm_query-1d.ref
- accept_test.py
- test_vs30_query
- test_ssh_generate
- accepttest_suite_grid.c
- test_grid_tool
- test_grid_lib_1d
- unittest_suite_lib.c
- test_lib_init
- test_lib_add_model_1d
- test_lib_query_1d
- test_lib_get_model_label_1d
- test_lib_get_ifunc_label_1d
- test_lib_setparam_querymode_gd_1d
- test_lib_setparam_querymode_ge_1d
- test_lib_query_1dgtl
- test_lib_model_version_1d
- test_lib_query_user_model
- test_lib_add_model_cvmlt
- test_lib_add_model_cmrg
- test_lib_add_model_cencal
- test_lib_add_model_cvmh
- test_lib_add_model_cvms
- test_lib_add_model_cvmsi
- test_lib_add_model_cvmnci
- test_lib_add_model_wfcvm
- test_lib_add_model_tape
/utilities
- code_count
- count.php
- pycvm
- setup.py
- pycvm
- basin_slice.py
- common.py
- cross_section.py
- cybershake.py
- depth_profile.py
- difference.py
- Doxyfile
- horizontal_slice.py
- vs30_slice.py
- plot_cross_section.py
- plot_horizontal_slice.py
- plot_vs30_map.py
- plot_z10_map.py
- plot_z25_map.py
basin_query
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
basin_query
SYNOPSIS
basin_query [-h] [-f config-file] [-m model] [-v vs-threshold]
[-p usermap] [-z zmin,zmax] [-d max-depth] [-i interval] < file.in
DESCRIPTION
The command basin_query allows you to retrieve the depth at which vs-threshold is first crossed. By default, vs-threshold is set to be 1000m/s, but that can easily be changed.
Common Paramters
-f Location of the UCVM configuration file. Typically, this is
../conf/ucvm.conf.
-m Model to query. Usually model is either cvms, cvmh, cvmsi, or
cencal.
-v Vs threshold to use. By default this is 1000m/s, but other com-
mon values include 2500m/s and 3000m/s.
Less Used Parameters
-p Custom vs30 and elevation map location.
-z Custom depth range for GTL/crust interpolation.
-d Maximum depth, in meters, to search. Default is 15000m.
-i Interval, in meters, go go by when searching for the depth.
Default is 20m. So basin_query will get the Vs value at 0m, 20m, 40m, and so on.
EXAMPLE
basin_query -f ../conf/ucvm.conf -m cvms -v 2500
Input: -118 34 Ctrl-D
Output: -118.0000 34.0000 4780.000 4780.000
SEE ALSO
ucvm_query(1)
Linux December 3, 2016 Linux
ecoalesce
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
ecoalesce
SYNOPSIS
ecoalesce [-h] input output
DESCRIPTION
The command ecoalesce helps compact an e-tree file that conforms either to CMU or SCEC standards. It does this by replacing eight adjacent octants with identical material properties at level N with a single octant containing the same material properties at level N-1. Usually, this command is run with ecompact as well.
Common Paramters
-h Shows the help message.
input E-tree input file. Typically, this was just extracted with the
ucvm2etree utilities.
output Compacted e-tree output.
EXAMPLE
ecoalesce chino_hills.etree compacted_chino_hills.etree
SEE ALSO
ecompact(1), ucvm2etree(1), ucvm2etree-extract-MPI(1), ucvm2etree-merge-MPI(1), ucvm2etree-sort-MPI(1)
Linux December 3, 2016 Linux
ecompact
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
ecompact
SYNOPSIS
ecompact [-h] input output
DESCRIPTION
The command ecompact helps compact an e-tree file that conforms either to CMU or SCEC standards. It does this by removing empty space in the Etree data structure. Usually, this command is run with ecoalesce as well.
Common Paramters
-h Shows the help message.
input E-tree input file. Typically, this was just extracted with the
ucvm2etree utilities.
output Compacted e-tree output.
EXAMPLE
ecompact chino_hills.etree compacted_chino_hills.etree
SEE ALSO
ecoalesce(1), ucvm2etree(1), ucvm2etree-extract-MPI(1), ucvm2etree-merge-MPI(1), ucvm2etree-sort-MPI(1)
Linux December 3, 2016 Linux
grd_query
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
grd_query
SYNOPSIS
grd_query [-h] [-e] [-v] -d datadir [-b bkgdir] < file.in
DESCRIPTION
The command grd_query queries data from a set of ArcGIS grid files in GridFloat format.
-h Shows the help message.
-e Employ GRD bathymetry heuristic.
-v Employ GRD vs30 heuristic.
-d Main ArcGIS Gridfloat data directory. Default is ./ned.
-b Background/Bathymetry data directory. Default is ./bath.
EXAMPLE
Input format is:
lon lat
Output format is:
lon lat val valid
SEE ALSO
grd2etree(1)
Linux December 3, 2016 Linux
grd2etree
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
grd2etree
SYNOPSIS
grd2etree [-h] -f config
DESCRIPTION
The command grd2etree extracts a SCEC-formatted Etree map from a set of DEM and Vs30 grid files in ArcGIS Gridfloat format.
Common Paramters
-h Shows the help message.
-f Specifies the location of the configuration file to use.
EXAMPLE
grd2etree -f ./grd2float_sample.conf
Where grd2float_sample.conf looks like:
# grd2etree UCM Map config file
# Domain corners coordinates (degrees): proj=+proj=aeqd +lat_0=36.0 +lon_0=-120.0 +x_0=0.0 +y_0=0.0 lon_0=-129.75 lat_0=40.75 rot=55.0
# Domain dimensions (meters): x-size=1800000.0 y-size=900000.0
# Spacing spacing=250.0
# Etree parameters and info title=UCVM_Elev_Vs30_Map_Wills_Wald author=P_Small date=05/2011 outputfile=../../model/ucvm/ucvm.e
# Grid data directories elev_hr_dir=/home/scec-00/USER/opt/ned elev_lr_dir=/home/scec-00/USER/opt/bath vs30_hr_dir=/home/scec-00/USER/opt/vs30/wills_gridfloat vs30_lr_dir=/home/scec-00/USER/opt/vs30/wald_gridfloat
SEE ALSO
grd_query(1)
Linux December 3, 2016 Linux
mesh-check
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
mesh-check
SYNOPSIS
mesh-check input format
DESCRIPTION
The command mesh-check does a basic quality assurance check of a mesh file. It checks to make sure that each record in the file is of the cor- rect size. Furthermore, it checks to make sure that each value is not NaN, infinity, or negative.
input The input mesh to check.
format The mesh format. Can be either IJK-12, IJK-20, or IJK-32
EXAMPLE
mesh-check new_mesh.mesh IJK-12
SEE ALSO
mesh-op(1), mesh-strip-ijk(1)
Linux December 3, 2016 Linux
mesh-op
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
mesh-op
SYNOPSIS
mesh-op op inmesh1 inmesh2 format outmesh
DESCRIPTION
The command mesh-op subtracts inmesh2 from inmesh1 and outputs the dif- ference to outmesh.
op The operation. Currently the only supported operation is "diff".
inmesh1 The first mesh to read.
inmesh2 The second mesh to read.
format Supported formats include IJK-12, IJK-20, and IJK-32.
outmesh The mesh that represents inmesh1 - inmesh2.
EXAMPLE
mesh-op diff ./inmesh1 ./inmesh2 IJK-12 ./outmesh
SEE ALSO
mesh-check(1), mesh-strip-ijk(1)
Linux December 3, 2016 Linux
mesh-strip-ijk
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
mesh-strip-ijk
SYNOPSIS
mesh-strip-ijk inmesh format outmesh
DESCRIPTION
The command mesh-strip-ijk converts an IJK-20 or IJK-32 mesh, inmesh, to an IJK-12 formatted mesh, outmesh.
inmesh The input mesh in IJK-20 or IJK-32 format.
format The format of the input mesh (IJK-20 or IJK-32).
outmesh The resulting IJK-12 mesh.
EXAMPLE
mesh-strip-ijk ijk20_mesh IJK-20 output_mesh
SEE ALSO
mesh-check(1), mesh-op(1)
Linux December 3, 2016 Linux
ucvm2etree-extract-MPI.txt
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
ucvm2etree-extract-MPI
SYNOPSIS
ucvm2etree-extract-MPI [-h] -f config
DESCRIPTION
Notice: This command is intended to be run as a MPI job (e.g. mpirun ./ucvm-extract-MPI). Please do not attempt to run it as a regular process.
The command ucvm2etree-extract-MPI extracts components of an e-tree from the specifications in a given configuration file, config.
Specifically, it divides the etree region into C columns for extraction. This is an embarrassingly parallel operation. A dispatcher (rank 0) farms out each column to a worker in a pool of N cores for extraction. Each worker queries UCVM for the points in its column and writes a flat-file formatted etree. After program execution, there are N sub-etree files, each locally unsorted. The extractor must be run on 2^Y + 1 cores where Y>0 and (2^Y) < C. The output flat file format is a list of octants(24 byte addr, 16 byte key, 12 byte payload) in arbitrary Z-order.
Since the number of points in a column depends on the minimum Vs values within that column, some columns will have high octant counts and others will have very low octant counts. Having sub-etrees that vary greatly in size is not optimal for the sorting operations that follow, so ucvm2etree-extract-MPI implements a simple octant balancing mechanism. When a worker has extracted more than X octants (the default 16M octants), it reports to the dispatcher that it cannot extract any more columns and terminates. This strategy approximately balances the sub- etrees so that they may be loaded into memory by ucvm2etree-sort-MPI. In the case of very large extractions where the dispatcher reports that all workers have reported they are full yet columns remain to be extracted, increase the job size by a factor of 2 until there is room for all the columns.
You would typically run this command, followed by ucvm2etree-sort-MPI and ucvm2etree-merge-MPI.
-h Displays the help message.
-f Uses configuration file, config.
EXAMPLE
mpirun -np 768 ucvm2etree-extract-MPI -f ./ucvm2etree_example.conf
Where ucvm2etree_example.conf is:
# Domain corners coordinates (clockwise, degrees):
proj=geo-bilinear lon_0=-119.288842 lat_0=34.120549
lon_1=-118.354016 lat_1=35.061096
lon_2=-116.846030 lat_2=34.025873
lon_3=-117.780976 lat_3=33.096503
# Domain dimensions (meters): x-size=180000.0000 y-size=135000.0000 z-size=61875.0000
# Blocks partition parameters: nx=32 ny=24
# Max freq, points per wavelength, Vs min max_freq=0.5 ppwl=4.0 vs_min=200.0
# Max allowed size of octants in meters max_octsize=10000.0
# Etree parameters and info title=ChinoHills_0.5Hz_200ms author=D_Gill date=05/2011 outputfile=./cmu_cvmh_chino_0.5hz_200ms.e format=etree
# UCVM parameters ucvmstr=cvms ucvm_interp_zrange=0.0,350.0 ucvmconf=../../conf/kraken/ucvm.conf
# Scratch scratch=/lustre/scratch/scecdave/scratch
# # Buffering parameters used by MPI version only # # Etree buffer size in MB buf_etree_cache=128 # Max octants to buffer for flat file during extraction buf_extract_mem_max_oct=4194304 # Max octants to save in flat file before reporting full during extrac- tion buf_extract_ffile_max_oct=16000000 # Max octants to read from input flat file during sorting buf_sort_ffile_max_oct=20000000 # Minimum number of octants between reports during merging buf_merge_report_min_oct=10000000 # MPI send/recv octant buffer size during merging buf_merge_sendrecv_buf_oct=4096 # Etree read/write octant buffer size during merging buf_merge_io_buf_oct=4194304
SEE ALSO
ucvm2etree-sort-MPI(1), ucvm2etree-merge-MPI(1), ucvm2etree(1)
Linux December 3, 2016 Linux
ucvm2etree-merge-MPI
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
ucvm2etree-merge-MPI
SYNOPSIS
ucvm2etree-merge-MPI [-h] -f config
DESCRIPTION
Notice: This command is intended to be run as a MPI job (e.g. mpirun ./ucvm-merge-MPI). Please do not attempt to run it as a regular process.
The command ucvm2etree-merge-MPI merges the sorted components of an e- tree from the ucvm2etree-sort-MPI command. It does so by reading in the specifications in a given configuration file, config.
Specifically, it merges N locally sorted etrees in flat file format into a final, compacted etree. This is essentially a merge sort on the keys from the addresses read from the local files. The cores at the lowest level of the merge tree each read in octants from two flat files in pre- order, merge sort the two sets of addresses, then pass the locally sorted list of addresses to a parent node for additional merging. This proceeds until the points rise to rank 1 which has a completely sorted list of etree addresses. Rank 0 takes this sorted list and performs a transac- tional append on the final Etree.
The merger must be run on 2^N cores. The program reads in input files that are in flat file format. In can output a merged Etree in either Etree format or flat file format. Although, due to space considerations, it strips the output flat file format to a pre-order list ot octants(16 byte key, 12 byte payload). The missing addr field is redundant and can be regenerated from the key field.
You would typically run this command after ucvm2etree-extract-MPI and ucvm2etree-merge-MPI.
-h Displays the help message.
-f Uses configuration file, config.
EXAMPLE
mpirun -np 768 ucvm2etree-merge-MPI -f ./ucvm2etree_example.conf
Where ucvm2etree_example.conf is:
# Domain corners coordinates (clockwise, degrees):
proj=geo-bilinear lon_0=-119.288842 lat_0=34.120549
lon_1=-118.354016 lat_1=35.061096
lon_2=-116.846030 lat_2=34.025873
lon_3=-117.780976 lat_3=33.096503
# Domain dimensions (meters): x-size=180000.0000 y-size=135000.0000 z-size=61875.0000
# Blocks partition parameters: nx=32 ny=24
# Max freq, points per wavelength, Vs min max_freq=0.5 ppwl=4.0 vs_min=200.0
# Max allowed size of octants in meters max_octsize=10000.0
# Etree parameters and info title=ChinoHills_0.5Hz_200ms author=D_Gill date=05/2011 outputfile=./cmu_cvmh_chino_0.5hz_200ms.e format=etree
# UCVM parameters ucvmstr=cvms ucvm_interp_zrange=0.0,350.0 ucvmconf=../../conf/kraken/ucvm.conf
# Scratch scratch=/lustre/scratch/scecdave/scratch
# # Buffering parameters used by MPI version only # # Etree buffer size in MB buf_etree_cache=128 # Max octants to buffer for flat file during extraction buf_extract_mem_max_oct=4194304 # Max octants to save in flat file before reporting full during extrac- tion buf_extract_ffile_max_oct=16000000 # Max octants to read from input flat file during sorting buf_sort_ffile_max_oct=20000000 # Minimum number of octants between reports during merging buf_merge_report_min_oct=10000000 # MPI send/recv octant buffer size during merging buf_merge_sendrecv_buf_oct=4096 # Etree read/write octant buffer size during merging buf_merge_io_buf_oct=4194304
SEE ALSO
ucvm2etree-extract-MPI(1), ucvm2etree-sort-MPI(1), ucvm2etree(1)
Linux December 3, 2016 Linux
ucvm2etree-sort-MPI
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
ucvm2etree-sort-MPI
SYNOPSIS
ucvm2etree-sort-MPI [-h] -f config
DESCRIPTION
Notice: This command is intended to be run as a MPI job (e.g. mpirun ./ucvm-sort-MPI). Please do not attempt to run it as a regular process.
The command ucvm2etree-sort-MPI sorts the extracted components of an e- tree from the ucvm2etree-extract-MPI command. It does so by reading in the specifications in a given configuration file, config.
Specifically, it sorts the sub-etrees produced by ucvm2etree-extract-MPI so that each file is in local pre-order (Z-order). Again, the is an embarrassingly parallel operation. Each rank in the job reads in one of the sub-etrees produced by the previous program, sorts the octants in Z- order, and writes the sorted octants to a new sub-etree. The sorter must be run on 2^Y cores where Y>0. The worker pool must be large enough to allow each worker to load all the octants from its assigned file into memory. By default, this octant limit is 20M octants. If a rank reports that the size of the sub-etree exceeds memory capacity, the 20M buffer size constant may be increased if memory allows, or alternatively, cvmby- cols-extract-MPI may be rerun with a larger job size to reduce the number of octants per file.
You would typically run this command after ucvm2etree-extract-MPI and before ucvm2etree-merge-MPI.
-h Displays the help message.
-f Uses configuration file, config.
EXAMPLE
mpirun -np 768 ucvm2etree-sort-MPI -f ./ucvm2etree_example.conf
Where ucvm2etree_example.conf is:
# Domain corners coordinates (clockwise, degrees):
proj=geo-bilinear lon_0=-119.288842 lat_0=34.120549
lon_1=-118.354016 lat_1=35.061096
lon_2=-116.846030 lat_2=34.025873
lon_3=-117.780976 lat_3=33.096503
# Domain dimensions (meters): x-size=180000.0000 y-size=135000.0000 z-size=61875.0000
# Blocks partition parameters: nx=32 ny=24
# Max freq, points per wavelength, Vs min max_freq=0.5 ppwl=4.0 vs_min=200.0
# Max allowed size of octants in meters max_octsize=10000.0
# Etree parameters and info title=ChinoHills_0.5Hz_200ms author=D_Gill date=05/2011 outputfile=./cmu_cvmh_chino_0.5hz_200ms.e format=etree
# UCVM parameters ucvmstr=cvms ucvm_interp_zrange=0.0,350.0 ucvmconf=../../conf/kraken/ucvm.conf
# Scratch scratch=/lustre/scratch/scecdave/scratch
# # Buffering parameters used by MPI version only # # Etree buffer size in MB buf_etree_cache=128 # Max octants to buffer for flat file during extraction buf_extract_mem_max_oct=4194304 # Max octants to save in flat file before reporting full during extrac- tion buf_extract_ffile_max_oct=16000000 # Max octants to read from input flat file during sorting buf_sort_ffile_max_oct=20000000 # Minimum number of octants between reports during merging buf_merge_report_min_oct=10000000 # MPI send/recv octant buffer size during merging buf_merge_sendrecv_buf_oct=4096 # Etree read/write octant buffer size during merging buf_merge_io_buf_oct=4194304
SEE ALSO
ucvm2etree-sort-MPI(1), ucvm2etree-merge-MPI(1), ucvm2etree(1)
Linux December 3, 2016 Linux
ucvm2etree
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
ucvm2etree
SYNOPSIS
ucvm2etree [-h] -f config
DESCRIPTION
The command ucvm2etree builds an e-tree from the specifications in a given configuration file, config.
Note that this is the serial version of the command, meaning that it will only run on a single process. As such, building a large e-tree can be very slow. For large e-trees, we strongly recommend using ucvm2etree-extract-MPI, ucvm2etree-sort-MPI, and ucvm2etree-merge-MPI.
-h Displays the help message.
-f Uses configuration file, config.
EXAMPLE
ucvm2etree -f ./ucvm2etree_example.conf
Where ucvm2etree_example.conf is:
# Domain corners coordinates (clockwise, degrees):
proj=geo-bilinear lon_0=-119.288842 lat_0=34.120549
lon_1=-118.354016 lat_1=35.061096
lon_2=-116.846030 lat_2=34.025873
lon_3=-117.780976 lat_3=33.096503
# Domain dimensions (meters): x-size=180000.0000 y-size=135000.0000 z-size=61875.0000
# Blocks partition parameters: nx=32 ny=24
# Max freq, points per wavelength, Vs min max_freq=0.5 ppwl=4.0 vs_min=200.0
# Max allowed size of octants in meters max_octsize=10000.0
# Etree parameters and info title=ChinoHills_0.5Hz_200ms author=D_Gill date=05/2011 outputfile=./cmu_cvmh_chino_0.5hz_200ms.e format=etree
# UCVM parameters ucvmstr=cvms ucvm_interp_zrange=0.0,350.0 ucvmconf=../../conf/kraken/ucvm.conf
# Scratch scratch=/lustre/scratch/scecdave/scratch
# # Buffering parameters used by MPI version only # # Etree buffer size in MB buf_etree_cache=128 # Max octants to buffer for flat file during extraction buf_extract_mem_max_oct=4194304 # Max octants to save in flat file before reporting full during extrac- tion buf_extract_ffile_max_oct=16000000 # Max octants to read from input flat file during sorting buf_sort_ffile_max_oct=20000000 # Minimum number of octants between reports during merging buf_merge_report_min_oct=10000000 # MPI send/recv octant buffer size during merging buf_merge_sendrecv_buf_oct=4096 # Etree read/write octant buffer size during merging buf_merge_io_buf_oct=4194304
SEE ALSO
ucvm2etree-extract-MPI(1), ucvm2etree-sort-MPI(1), ucvm2etree-merge-MPI(1)
Linux December 3, 2016 Linux
ucvm2mesh-mpi
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
ucvm2mesh-mpi
SYNOPSIS
ucvm2mesh-mpi [-h] -f config
DESCRIPTION
Notice: ucvm2mesh-mpi is meant to be run as a MPI job, not as a stand- alone executable.
The command ucvm2mesh-mpi generates a mesh in either IJK-12, IJK-20, IJK-32, or SORD format. Unlike its serial version, ucvm2mesh this command can use multiple cores to generate the mesh. It does so by reading in the specifications in a given configuration file, config.
This mesh can then be used in forward 3D wave propagation simulation software such as AWP-ODC.
-h Displays the help message.
-f Uses configuration file, config.
EXAMPLE
mpirun -np [procs] ucvm2mesh-mpi -f ./ucvm2mesh_example.conf
Where ucvm2mesh_example.conf is:
# List of CVMs to query ucvmlist=cvmh
# UCVM conf file ucvmconf=../conf/kraken/ucvm.conf
# Gridding cell centered or vertex gridtype=CENTER
# Spacing of cells spacing=2000.0
# Projection proj=+proj=utm +datum=WGS84 +zone=11 rot=-40.0 x0=-122.3 y0=34.7835 z0=0.0
# Number of cells along each dim nx=384 ny=248 nz=25
# Partitioning of grid among processors px=2 py=2 pz=5
# Vs/Vp minimum vp_min=0 vs_min=0
# Mesh and grid files, format meshfile=/lustre/scratch/user/mesh_cvmh_ijk12_2000m.media gridfile=/lustre/scratch/user/mesh_cvmh_ijk12_2000m.grid meshtype=IJK-12
# Location of scratch dir scratch=/lustre/scratch/user/scratch
SEE ALSO
ucvm2mesh(1)
Linux December 3, 2016 Linux
ucvm2mesh
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
ucvm2mesh
SYNOPSIS
ucvm2mesh [-h] -f config
DESCRIPTION
The command ucvm2mesh generates a mesh in either IJK-12, IJK-20, IJK-32, or SORD format. It does so by reading in the specifications in a given configuration file, config.
This mesh can then be used in forward 3D wave propagation simulation software such as AWP-ODC.
-h Displays the help message.
-f Uses configuration file, config.
EXAMPLE
ucvm2mesh -f ./ucvm2mesh_example.conf
Where ucvm2mesh_example.conf is:
# List of CVMs to query ucvmlist=cvmh
# UCVM conf file ucvmconf=../conf/kraken/ucvm.conf
# Gridding cell centered or vertex gridtype=CENTER
# Spacing of cells spacing=2000.0
# Projection proj=+proj=utm +datum=WGS84 +zone=11 rot=-40.0 x0=-122.3 y0=34.7835 z0=0.0
# Number of cells along each dim nx=384 ny=248 nz=25
# Partitioning of grid among processors px=2 py=2 pz=5
# Vs/Vp minimum vp_min=0 vs_min=0
# Mesh and grid files, format meshfile=/lustre/scratch/user/mesh_cvmh_ijk12_2000m.media gridfile=/lustre/scratch/user/mesh_cvmh_ijk12_2000m.grid meshtype=IJK-12
# Location of scratch dir scratch=/lustre/scratch/user/scratch
SEE ALSO
ucvm2mesh-mpi(1)
Linux December 3, 2016 Linux
ucvm_query
UCVM(1) BSD General Commands Manual UCVM(1)
NAME
ucvm_query
SYNOPSIS
ucvm_query [-h] [-f config] [-m model] [-c coordtype] [-p map] [-v]
[-z zmin,zmax]
DESCRIPTION
The command ucvm_query queries an installed velocity model to retreive its material properties at a particular latitude and longitude.
Any set of crustal and GTL velocity models may be selected and queried in order of preference. Points may be queried by (lon,lat,dep) or (lon,lat,elev) and the coordinate conversions for a particular model are handled transparently.
Common Paramters
-h Displays the help message.
-f Location of the configuration file, config, that tells the pro-
gram which velocity models are installed.
-m A comma-separated list of models to query.
Less Used Parameters
-c Z-coordinate mode. Geo-depth (default) is "gd", but queries can
also be done by elevation as specified by "ge".
-p User-defined map of vs30 and elevation data.
-v Display model version information only.
-z Specifies depth range for gtl/crust interpolation.
EXAMPLE
ucvm_query -f ../conf/ucvm.conf -m cvms
Input format is:
lon lat Z
Output format is:
lon lat Z surf vs30 crustal cr_vp cr_vs cr_rho gtl gtl_vp gtl_vs
gtl_rho cmb_algo cmb_vp cmb_vs cmb_rho
If running in interactive mode, please use Ctrl-D to end the input.
SEE ALSO
basin_query(1)
Linux December 3, 2016 Linux
vs30_query
scecadms-MacBook-Pro-2:bin maechlin$ ./vs30_query -h Usage: vs30_query [-h] [-m models<:ifunc>] [-f config] [-i inter]
where: -h This help message -f Configuration file. Default is ./ucvm.conf. -i Interval between query points along z-axis (m, default is 1) -m Comma delimited list of crustal/GTL models to query in order Notes: - If running interactively, type Cntl-D to end input coord list.
Version: 15.10.0