Difference between revisions of "UCVM on Compute Nodes"
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== allocation interactive nodes == | == allocation interactive nodes == | ||
| − | %salloc --ntasks=1 --time=1:00:00 --account=scec_608 | + | Information To Prepare: |
| + | * scalloc - command that will reserve a dedicated worker compute node for your program. | ||
| + | ** Using dedicated worker nodes should let your program run faster than shared headnode | ||
| + | * Number of tasks - typically 1 unless running MPI codes | ||
| + | * Expected max duration of program : Format HH:MM:SS | ||
| + | ** Longer runtimes can | ||
| + | ** HPC systems typically have max runtime (e.g. 24:00:00 or 48:00:00). | ||
| + | ** Must make arrangements with HPC system operates for longer runtimes | ||
| + | * allocation account - who's allocation will be charged for computing time | ||
| + | ** CARC offers "no-cost" allocations to University researchers that request them | ||
| + | ** Allocation will also include dedicated disk storage on CARC /project filesystem (e.g. /project/maechlin_162 /project/scec_608) | ||
| + | * Example command for running program on discovery: | ||
| + | **%salloc --ntasks=1 --time=1:00:00 --account=scec_608 | ||
== Example profile query == | == Example profile query == | ||
Revision as of 03:41, 26 April 2021
Examples of running UCVM Query on compute nodes on Discovery
Contents
allocation interactive nodes
Information To Prepare:
- scalloc - command that will reserve a dedicated worker compute node for your program.
- Using dedicated worker nodes should let your program run faster than shared headnode
- Number of tasks - typically 1 unless running MPI codes
- Expected max duration of program : Format HH:MM:SS
- Longer runtimes can
- HPC systems typically have max runtime (e.g. 24:00:00 or 48:00:00).
- Must make arrangements with HPC system operates for longer runtimes
- allocation account - who's allocation will be charged for computing time
- CARC offers "no-cost" allocations to University researchers that request them
- Allocation will also include dedicated disk storage on CARC /project filesystem (e.g. /project/maechlin_162 /project/scec_608)
- Example command for running program on discovery:
- %salloc --ntasks=1 --time=1:00:00 --account=scec_608
Example profile query
%ucvm_query -f /project/scec_608/<username>/ucvm_bin/conf/ucvm.conf -m cvmsi < rpv.in > rpv_cvmsi.out
- ucvm_query -f /project/maechlin_162/ucvm_bin/conf/ucvm.conf -m cvmsi < rpv.in > rpv_cvmsi.out
slurm batch script
- %cat ucvm_query.job
- %sbatch ucvm_query.job
- %squeue -u maechlin
- %cat rpv_cvmsi.out
